All products that utilize Intuit QuickBooks Payments merchant services settle credit card batches automatically at 3:00 pm Pacific Time.
If a credit card processing report details transactions that processed after 3:00 pm Pacific Time, the report may show transactions that were included in the next day's batch.
For more detailed information on when batches settle, see Understand when money is funded or batches settled
A great way to reconcile your deposits from Intuit is to Search for deposits or fees in the Merchant Service Center.